A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3053169



Internal ID21185172
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:45400760..45401083hg38UCSC Ensembl
chr19:45904018..45904341hg19UCSC Ensembl
Cytoband19q13.32
Allele length
AssemblyAllele length
hg38324
hg19324
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14018037
SamplesNA12878
Known GenesPPP1R13L
MethodSequencing
AnalysisCombines the NGS (e.g., Illumina) and SMS (e.g., Pacbio) for detecting large and small SVs (parameters the same as commit eee31f6 of https://bitbucket.org/xianfan/hybridassemblysv)
Platform
Comments
ReferenceFan_et_al_2017
Pubmed ID28104618
Accession Number(s)nsv3053169
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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