A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3052524



Internal ID21184558
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:84928558..84928635hg38UCSC Ensembl
chr15:85471789..85471866hg19UCSC Ensembl
Cytoband15q25.3
Allele length
AssemblyAllele length
hg3878
hg1978
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14016971
SamplesNA12878
Known GenesSLC28A1
MethodSequencing
AnalysisCombines the NGS (e.g., Illumina) and SMS (e.g., Pacbio) for detecting large and small SVs (parameters the same as commit eee31f6 of https://bitbucket.org/xianfan/hybridassemblysv)
Platform
Comments
ReferenceFan_et_al_2017
Pubmed ID28104618
Accession Number(s)nsv3052524
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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