A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv2536



Internal ID15200413
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:52366204..52398811hg38UCSC Ensembl
Outerchr19:52869457..52902064hg19UCSC Ensembl
Outerchr19:57561269..57593876hg18UCSC Ensembl
Outerchr19:57561269..57593876hg17UCSC Ensembl
Cytoband19q13.33
Allele length
AssemblyAllele length
hg3832608
hg1932608
hg1832608
hg1732608
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv7451
SamplesNA12156
Known GenesZNF528, ZNF610, ZNF880
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv2536
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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