A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv2273



Internal ID5087159
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:42383229..42428847hg19UCSC Ensembl
Outerchr18:40637227..40682845hg18UCSC Ensembl
Outerchr18:40637227..40682845hg17UCSC Ensembl
Cytoband18q12.3
Allele length
AssemblyAllele length
hg196178
hg186178
hg176178
Variant TypeCNV Loss
Copy Number
Allele State
Allele OriginNot tested
Probe Count
Merged StatusS
Merged Variants
Supporting Variantsnssv6755
SamplesNA12156
Known GenesSETBP1
Method
AnalysisSample level sites were merged to generate a set of non-redundant variant regions. Two non-redundant inversion variants (chr 2 positions 89438708-89655419 and 89958869-91208466) were corrected from the original publication for coordinates and associated sample-level data.
PlatformCapillary
Comments
ReferenceKidd et al 2008
Pubmed ID18451855
Accession Number(s)nsv2273
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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