A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1853



Internal ID15199730
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:69928393..70234953hg38UCSC Ensembl
Outerchr16:69962296..70268856hg19UCSC Ensembl
Outerchr16:68519797..68826357hg18UCSC Ensembl
Outerchr16:68519797..68826357hg17UCSC Ensembl
Cytoband16q22.1
Allele length
AssemblyAllele length
hg38306561
hg19306561
hg18306561
hg17306561
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2148, nssv1315
SamplesNA18555, NA19240
Known GenesCLEC18A, CLEC18C, LOC100506060, MIR140, MIR1972-1, MIR1972-2, PDPR, PDXDC2P, WWP2
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv1853
Frequency
Sample Size9
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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