A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1690



Internal ID15546253
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:100515110..100565134hg38UCSC Ensembl
Outerchr15:101055315..101105339hg19UCSC Ensembl
Outerchr15:98872838..98922862hg18UCSC Ensembl
Outerchr15:98872838..98922862hg17UCSC Ensembl
Cytoband15q26.3
Allele length
AssemblyAllele length
hg3850025
hg1950025
hg1850025
hg1750025
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv7221, nssv4180
SamplesNA12156, NA12878
Known GenesCERS3, PRKXP1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv1690
Frequency
Sample Size9
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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