A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1653



Internal ID8513198
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:88870409..88915341hg38UCSC Ensembl
Outerchr15:89413640..89458572hg19UCSC Ensembl
Outerchr15:87214644..87259576hg18UCSC Ensembl
Outerchr15:87214644..87259576hg17UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg3844933
hg1944933
hg1844933
hg1744933
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv7212
SamplesNA12156
Known GenesACAN, HAPLN3, MFGE8
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv1653
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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