A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1620



Internal ID15546183
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:76569811..76621947hg38UCSC Ensembl
Outerchr15:76862152..76914288hg19UCSC Ensembl
Outerchr15:74649207..74701343hg18UCSC Ensembl
Outerchr15:74649207..74701343hg17UCSC Ensembl
Cytoband15q24.3
Allele length
AssemblyAllele length
hg3852137
hg1952137
hg1852137
hg1752137
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv10936, nssv7201, nssv4165, nssv1265, nssv2117
SamplesNA12156, NA12878, NA15510, NA18555, NA19240
Known GenesSCAPER
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv1620
Frequency
Sample Size9
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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