A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1600



Internal ID15546163
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:71393522..71428758hg38UCSC Ensembl
Outerchr15:71685861..71721097hg19UCSC Ensembl
Outerchr15:69472915..69508151hg18UCSC Ensembl
Outerchr15:69472915..69508151hg17UCSC Ensembl
Cytoband15q23
Allele length
AssemblyAllele length
hg3835237
hg1935237
hg1835237
hg1735237
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1261, nssv6638, nssv4163
SamplesNA12156, NA12878, NA19240
Known GenesTHSD4
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv1600
Frequency
Sample Size9
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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