A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1541



Internal ID15546104
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:54898273..54955004hg38UCSC Ensembl
Outerchr15:55190471..55247202hg19UCSC Ensembl
Outerchr15:52977763..53034494hg18UCSC Ensembl
Outerchr15:52977763..53034494hg17UCSC Ensembl
Cytoband15q21.3
Allele length
AssemblyAllele length
hg3856732
hg1956732
hg1856732
hg1756732
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv4153, nssv10931, nssv10054, nssv2108, nssv6633
SamplesNA12156, NA12878, NA18956, NA15510, NA18555
Known Genes
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv1541
Frequency
Sample Size9
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer