A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1540



Internal ID15546103
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:54820575..54858545hg38UCSC Ensembl
Outerchr15:55112773..55150743hg19UCSC Ensembl
Outerchr15:52900065..52938035hg18UCSC Ensembl
Outerchr15:52900065..52938035hg17UCSC Ensembl
Cytoband15q21.3
Allele length
AssemblyAllele length
hg3810522
hg1910522
hg1810522
hg1710522
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv5558, nssv1252
SamplesNA19240, NA19129
Known Genes
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv1540
Frequency
Sample Size9
Observed Gain2
Observed Loss0
Observed Complex0
Frequencyn/a


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