A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1485



Internal ID15199362
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:34354006..34601539hg38UCSC Ensembl
Outerchr15:34646207..34893740hg19UCSC Ensembl
Outerchr15:32433499..32681032hg18UCSC Ensembl
Outerchr15:32433499..32681032hg17UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38247534
hg19247534
hg18247534
hg17247534
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv5548, nssv1246, nssv6625, nssv9512, nssv10930
SamplesNA18507, NA12156, NA15510, NA19240, NA19129
Known GenesGOLGA8A, GOLGA8B, LPCAT4, MIR1233-1, MIR1233-2, NUTM1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv1485
Frequency
Sample Size9
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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