Variant DetailsVariant: nsv1161976 Internal ID | 18956600 | Landmark | | Location Information | | Cytoband | 10q22.3 | Allele length | Assembly | Allele length | hg38 | 8417 | hg19 | 8417 |
| Variant Type | CNV deletion | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv4038289, nssv4038294, nssv4038295, nssv4038308, nssv4038342, nssv4038330, nssv4038309, nssv4038338, nssv4038307, nssv4038336, nssv4038343, nssv4038291, nssv4038305, nssv4038333, nssv4038306, nssv4038284, nssv4038325, nssv4038332, nssv4038296, nssv4038290, nssv4038298, nssv4038320, nssv4038318, nssv4038301, nssv4038283, nssv4038331, nssv4038341, nssv4038313, nssv4038340, nssv4038286, nssv4038319, nssv4038293, nssv4038287, nssv4038299, nssv4038303, nssv4038288, nssv4038312, nssv4038335, nssv4038324, nssv4038322, nssv4038337, nssv4038321, nssv4038323, nssv4038311, nssv4038316, nssv4038315, nssv4038292, nssv4038310, nssv4038302, nssv4038297, nssv4038314, nssv4038328, nssv4038327, nssv4038329, nssv4038285, nssv4038300, nssv4038304, nssv4038334, nssv4038339, nssv4038317, nssv4038326, nssv4038282, nssv4038344 | Samples | | Known Genes | C10orf11 | Method | SNP array | Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. | Platform | Affymetrix SNP Array 6.0 | Comments | | Reference | Lou_et_al_2015 | Pubmed ID | 26073780 | Accession Number(s) | nsv1161976
| Frequency | Sample Size | 369 | Observed Gain | 0 | Observed Loss | 63 | Observed Complex | 0 | Frequency | n/a |
|
|