Variant DetailsVariant: nsv1161857Internal ID | 18957560 | Landmark | | Location Information | | Cytoband | 9p13.3 | Allele length | Assembly | Allele length | hg38 | 131896 | hg19 | 131895 |
| Variant Type | CNV deletion | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv4037526 | Samples | | Known Genes | ARID3C, CCL27, CNTFR, CNTFR-AS1, DCTN3, GALT, IL11RA, RPP25L, SIGMAR1 | Method | SNP array | Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. | Platform | Affymetrix SNP Array 6.0 | Comments | | Reference | Lou_et_al_2015 | Pubmed ID | 26073780 | Accession Number(s) | nsv1161857
| Frequency | Sample Size | 369 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
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