Variant DetailsVariant: nsv1160655![](http://dgv.tcag.ca/gb2/gbrowse_img/dgv2_hg38/?name=chr19:49489110..49841830;width=800;overview=1) Internal ID | 18956396 | Landmark | | Location Information | | Cytoband | 19q13.33 | Allele length | Assembly | Allele length | hg38 | 352721 | hg19 | 352721 |
| Variant Type | CNV deletion | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv4039945 | Samples | | Known Genes | ADM5, AP2A1, BCL2L12, CPT1C, FCGRT, FUZ, IRF3, MED25, MIR150, MIR5088, MIR6799, MIR6800, NOSIP, PRMT1, PRR12, PRRG2, PTOV1-AS1, RCN3, RPL13A, RPL13AP5, RPS11, RRAS, SCAF1, SNORD32A, SNORD33, SNORD34, SNORD35A, SNORD35B, TSKS | Method | SNP array | Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. | Platform | Affymetrix SNP Array 6.0 | Comments | | Reference | Lou_et_al_2015 | Pubmed ID | 26073780 | Accession Number(s) | nsv1160655
| Frequency | Sample Size | 369 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
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