Variant DetailsVariant: nsv1160587Internal ID | 18957326 | Landmark | | Location Information | | Cytoband | 19p13.2 | Allele length | Assembly | Allele length | hg38 | 182520 | hg19 | 182520 |
| Variant Type | CNV deletion | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | dgv138n111 | Supporting Variants | nssv4039719 | Samples | | Known Genes | ASNA1, BEST2, C19orf43, DHPS, FBXW9, HOOK2, JUNB, MAN2B1, PRDX2, RNASEH2A, SNORD41, TNPO2, WDR83, WDR83OS, ZNF791 | Method | SNP array | Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. | Platform | Affymetrix SNP Array 6.0 | Comments | | Reference | Lou_et_al_2015 | Pubmed ID | 26073780 | Accession Number(s) | nsv1160587
| Frequency | Sample Size | 369 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
|
|