Variant DetailsVariant: nsv1160264 Internal ID | 18956535 | Landmark | | Location Information | | Cytoband | 15q13.2 | Allele length | Assembly | Allele length | hg38 | 171612 | hg19 | 171612 |
| Variant Type | CNV duplication | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv4032118, nssv4032205, nssv4032167, nssv4032108, nssv4032197, nssv4032127, nssv4032136, nssv4032146, nssv4032194, nssv4032152, nssv4032171, nssv4032155, nssv4032117, nssv4032163, nssv4032188, nssv4032177, nssv4032139, nssv4032148, nssv4032141, nssv4032144, nssv4032100, nssv4032200, nssv4032175, nssv4032195, nssv4032128, nssv4032116, nssv4032180, nssv4032170, nssv4032109, nssv4032115, nssv4032126, nssv4032143, nssv4032164, nssv4032192, nssv4032178, nssv4032204, nssv4032111, nssv4032169, nssv4032176, nssv4032123, nssv4032140, nssv4032201, nssv4032104, nssv4032145, nssv4032172, nssv4032150, nssv4032142, nssv4032193, nssv4032134, nssv4032120, nssv4032189, nssv4032105, nssv4032199, nssv4032122, nssv4032183, nssv4032112, nssv4032161, nssv4032103, nssv4032187, nssv4032132, nssv4032106, nssv4032138, nssv4032174, nssv4032147, nssv4032110, nssv4032173, nssv4032101, nssv4032149, nssv4032157, nssv4032124, nssv4032107, nssv4032154, nssv4032119, nssv4032137, nssv4032153, nssv4032129, nssv4032113, nssv4032184, nssv4032098, nssv4032203, nssv4032160, nssv4032162, nssv4032121, nssv4032158, nssv4032135, nssv4032151, nssv4032131, nssv4032130, nssv4032168, nssv4032125, nssv4032191, nssv4032198, nssv4032186, nssv4032196, nssv4032114, nssv4032185, nssv4032181, nssv4032179, nssv4032159, nssv4032102, nssv4032182, nssv4032133, nssv4032156, nssv4032202, nssv4032190, nssv4032165, nssv4032166, nssv4032099 | Samples | | Known Genes | CHRFAM7A, LOC101059918 | Method | SNP array | Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. | Platform | Affymetrix SNP Array 6.0 | Comments | | Reference | Lou_et_al_2015 | Pubmed ID | 26073780 | Accession Number(s) | nsv1160264
| Frequency | Sample Size | 369 | Observed Gain | 108 | Observed Loss | 0 | Observed Complex | 0 | Frequency | n/a |
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