A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10824



Internal ID15499101
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:31980357..32046247hg38UCSC Ensembl
Outerchr6:31948134..32014024hg19UCSC Ensembl
Outerchr6:32056113..32122002hg18UCSC Ensembl
Outerchr6:32056113..32122002hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3865891
hg1965891
hg1865890
hg1765890
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14916, nssv15582, nssv14235, nssv16454, nssv14197, nssv15249, nssv14643, nssv16131, nssv14034
SamplesNA18502, NA11830, NA18860, NA07048, NA18975, NA10863, NA18537, NA18517, NA12740
Known GenesC4A, C4B, C4B_2, CYP21A1P, CYP21A2, STK19, TNXA, TNXB
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10824
Frequency
Sample Size31
Observed Gain5
Observed Loss4
Observed Complex0
Frequencyn/a


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