A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10815



Internal ID15845778
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:31270175..31279234hg38UCSC Ensembl
Outerchr6:31237952..31247011hg19UCSC Ensembl
Outerchr6:31345931..31354990hg18UCSC Ensembl
Outerchr6:31345931..31354990hg17UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg389060
hg199060
hg189060
hg179060
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15218, nssv16071, nssv13877, nssv16620
SamplesNA12155, NA18563, NA18860, NA19221
Known GenesHLA-C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10815
Frequency
Sample Size31
Observed Gain4
Observed Loss0
Observed Complex0
Frequencyn/a


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