A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10809



Internal ID15499086
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:29724796..29826342hg38UCSC Ensembl
Outerchr6:29692573..29794119hg19UCSC Ensembl
Outerchr6:29800552..29902098hg18UCSC Ensembl
Outerchr6:29800552..29902098hg17UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg38101547
hg19101547
hg18101547
hg17101547
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15151, nssv13940, nssv13727
SamplesNA18563, NA19240, NA18853
Known GenesHCG4, HLA-F, HLA-F-AS1, IFITM4P, LOC554223
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10809
Frequency
Sample Size31
Observed Gain3
Observed Loss0
Observed Complex0
Frequencyn/a


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