A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10799



Internal ID15845762
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:255920..384864hg38UCSC Ensembl
Outerchr6:255920..384864hg19UCSC Ensembl
Outerchr6:200920..329864hg18UCSC Ensembl
Outerchr6:200920..329864hg17UCSC Ensembl
Cytoband6p25.3
Allele length
AssemblyAllele length
hg38128945
hg19128945
hg18128945
hg17128945
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv12859, nssv15921, nssv16184, nssv13180, nssv16500, nssv14188, nssv15038, nssv13952, nssv15039, nssv15031, nssv14476, nssv14446, nssv13914, nssv14553, nssv16373, nssv13922, nssv14434, nssv15008, nssv13957, nssv13910, nssv13825, nssv15069, nssv15837, nssv15733, nssv13995, nssv12911, nssv13955, nssv14526, nssv14978, nssv15342, nssv14208, nssv13706
SamplesNA18502, NA11830, NA18980, NA07029, NA18504, NA12155, NA12802, NA18860, NA07048, NA10839, NA18975, NA19007, NA10847, NA10863, NA12872, NA18572, NA19221, NA18537, NA18853, NA19132, NA18517, NA18564, NA19240, NA19144, NA12740, NA18972, NA18552
Known GenesDUSP22
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10799
Frequency
Sample Size31
Observed Gain24
Observed Loss6
Observed Complex0
Frequencyn/a


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