A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10712



Internal ID15845675
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:82124039..82138705hg38UCSC Ensembl
Outerchr5:81419858..81434524hg19UCSC Ensembl
Outerchr5:81455614..81470280hg18UCSC Ensembl
Outerchr5:81455614..81470280hg17UCSC Ensembl
Cytoband5q14.2
Allele length
AssemblyAllele length
hg3814667
hg1914667
hg1814667
hg1714667
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv13477, nssv15584, nssv13495, nssv13515, nssv13896, nssv15893, nssv12551, nssv13550, nssv15297, nssv14832, nssv13352, nssv13132, nssv13625, nssv13277, nssv15840, nssv13846, nssv15321, nssv13316, nssv15193, nssv13698, nssv12349, nssv12730, nssv13614, nssv14529, nssv14009, nssv14461, nssv14468, nssv13738, nssv14013, nssv14014
SamplesNA18502, NA11830, NA18980, NA07029, NA18504, NA12155, NA18563, NA12802, NA18860, NA18942, NA07048, NA10839, NA18975, NA19007, NA10847, NA10863, NA12872, NA18572, NA19221, NA18537, NA18853, NA19132, NA18517, NA18564, NA19240, NA19144, NA12740, NA19173, NA18972, NA18552
Known GenesATG10
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10712
Frequency
Sample Size31
Observed Gain0
Observed Loss30
Observed Complex0
Frequencyn/a


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