A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10661



Internal ID15845624
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:116614508..116661528hg38UCSC Ensembl
Outerchr1:117157130..117204150hg19UCSC Ensembl
Outerchr1:116958653..117005673hg18UCSC Ensembl
Outerchr1:116869172..116916192hg17UCSC Ensembl
Cytoband1p13.1
Allele length
AssemblyAllele length
hg3847021
hg1947021
hg1847021
hg1747021
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv18075, nssv17078, nssv16437, nssv16421, nssv17076, nssv23060, nssv19431, nssv17073, nssv22094, nssv16759, nssv24000
SamplesNA12155, NA18860, NA07048, NA10839, NA10863, NA12872, NA18572, NA18537, NA19132, NA18517, NA18972
Known GenesIGSF3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10661
Frequency
Sample Size31
Observed Gain7
Observed Loss4
Observed Complex0
Frequencyn/a


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