A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10660



Internal ID15845623
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:5088404..5095646hg38UCSC Ensembl
Outerchr5:5088517..5095759hg19UCSC Ensembl
Outerchr5:5141517..5148759hg18UCSC Ensembl
Outerchr5:5141517..5148759hg17UCSC Ensembl
Cytoband5p15.32
Allele length
AssemblyAllele length
hg387243
hg197243
hg187243
hg177243
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14541, nssv14397
SamplesNA18860, NA19132
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10660
Frequency
Sample Size31
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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