A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10629



Internal ID15498906
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:187724452..188143423hg38UCSC Ensembl
Outerchr4:188645606..189064577hg19UCSC Ensembl
Outerchr4:188882600..189301571hg18UCSC Ensembl
Outerchr4:189020755..189439726hg17UCSC Ensembl
Cytoband4q35.2
Allele length
AssemblyAllele length
hg38418972
hg19418972
hg18418972
hg17418972
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv12527, nssv12495
SamplesNA18563, NA18537
Known GenesTRIML1, TRIML2, ZFP42
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10629
Frequency
Sample Size31
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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