A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10617



Internal ID15498894
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:109674658..109715089hg38UCSC Ensembl
Outerchr1:110217280..110257711hg19UCSC Ensembl
Outerchr1:110018803..110059234hg18UCSC Ensembl
Outerchr1:109929322..109969753hg17UCSC Ensembl
Cytoband1p13.3
Allele length
AssemblyAllele length
hg3840432
hg1940432
hg1840432
hg1740432
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv17080, nssv17101, nssv16102, nssv15753, nssv16438, nssv15095, nssv19769, nssv20744, nssv16083, nssv23389, nssv18432, nssv17415, nssv14755, nssv17747, nssv17402, nssv17072, nssv20099, nssv20100, nssv16742, nssv15777, nssv17094, nssv16426, nssv17745, nssv21074, nssv17740, nssv18771, nssv16429, nssv16432, nssv17090, nssv17410, nssv23699, nssv23079
SamplesNA12802, NA18975, NA19173, NA10847, NA18972, NA18517, NA19144, NA18860, NA07029, NA18563, NA07048, NA18537, NA18572, NA18502, NA18942, NA19221, NA18552, NA19132, NA19240, NA18853, NA18980
Known GenesGSTM1, GSTM2, GSTM5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10617
Frequency
Sample Size31
Observed Gain21
Observed Loss0
Observed Complex0
Frequencyn/a


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