A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1058677



Internal ID18801208
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:1054061..1283189hg38UCSC Ensembl
Innerchr19:1054060..1283188hg19UCSC Ensembl
Innerchr19:1005060..1234188hg18UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg38229129
hg19229129
hg18229129
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3564599
Samples
Known GenesABCA7, ATP5D, C19orf24, C19orf26, CIRBP, CIRBP-AS1, GPX4, HMHA1, MIDN, POLR2E, SBNO2, STK11
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1058677
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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