A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10586



Internal ID15498863
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:150953019..150965919hg38UCSC Ensembl
Outerchr4:151874171..151887071hg19UCSC Ensembl
Outerchr4:152093621..152106521hg18UCSC Ensembl
Outerchr4:152231776..152244676hg17UCSC Ensembl
Cytoband4q31.3
Allele length
AssemblyAllele length
hg3812901
hg1912901
hg1812901
hg1712901
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv13662, nssv13701, nssv12500, nssv13051
SamplesNA18860, NA18502, NA19240, NA18853
Known GenesLRBA
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10586
Frequency
Sample Size31
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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