A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv10580



Internal ID15845543
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:142873005..142935206hg38UCSC Ensembl
Outerchr4:143794158..143856359hg19UCSC Ensembl
Outerchr4:144013608..144075809hg18UCSC Ensembl
Outerchr4:144151763..144213964hg17UCSC Ensembl
Cytoband4q31.21
Allele length
AssemblyAllele length
hg3862202
hg1962202
hg1862202
hg1762202
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv13671
SamplesNA18860
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv10580
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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