A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1057489



Internal ID19146708
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32553179..33644789hg38UCSC Ensembl
Innerchr16:32564500..33447256hg19UCSC Ensembl
Innerchr16:32472001..33354757hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg381091611
hg19882757
hg18882757
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2874n100
Supporting Variantsnssv3551899
Samples
Known GenesLOC390705, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1057489
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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