A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv1057170

Internal ID

18799701

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr17:36112573..36265379	hg38	UCSC Ensembl
Inner	chr17:34439966..34629684	hg19	UCSC Ensembl
Inner	chr17:31464079..31653797	hg18	UCSC Ensembl

Cytoband

17q12

Allele length

Assembly	Allele length
hg38	152807
hg19	189719
hg18	189719

Variant Type

CNV gain

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv3562196, nssv3562197, nssv3562098, nssv3720795, nssv3561997, nssv3562058, nssv3562057, nssv3720779, nssv3562244, nssv3562130, nssv3562209, nssv3562184, nssv3562226, nssv3562162, nssv3562041, nssv3562025, nssv3720796, nssv3720769, nssv3562123, nssv3562173, nssv3562135, nssv3562208, nssv3562203, nssv3562157, nssv3562214, nssv3562001, nssv3561995, nssv3562242, nssv3562060, nssv3562072, nssv3562023, nssv3720785, nssv3562097, nssv3562085, nssv3562174, nssv3562251, nssv3562159, nssv3562205, nssv3562171, nssv3562054, nssv3562166, nssv3562012, nssv3562206, nssv3562091, nssv3562056, nssv3562147, nssv3562100, nssv3562268, nssv3562145, nssv3562087, nssv3562076, nssv3562139, nssv3562032, nssv3562128, nssv3720786, nssv3562109, nssv3562104, nssv3562031, nssv3562187, nssv3562052, nssv3562037, nssv3562040, nssv3562114, nssv3562090, nssv3562027, nssv3562036, nssv3720791, nssv3562250, nssv3562176, nssv3562024, nssv3562153, nssv3562061, nssv3562086, nssv3562064, nssv3562093, nssv3562212, nssv3562179, nssv3562117, nssv3562116, nssv3562113, nssv3562178, nssv3561999, nssv3562131, nssv3562138, nssv3562249, nssv3562183, nssv3562080, nssv3720800, nssv3562194, nssv3562160, nssv3720781, nssv3562133, nssv3562211, nssv3720794, nssv3720770, nssv3562228, nssv3562136, nssv3562048, nssv3562102, nssv3562082, nssv3562077, nssv3562035, nssv3562107, nssv3562193, nssv3562266, nssv3561987, nssv3562088, nssv3562004, nssv3562181, nssv3562065, nssv3720774, nssv3561990, nssv3562070, nssv3562020, nssv3562141, nssv3562046, nssv3562101, nssv3562039, nssv3562204, nssv3561993, nssv3562121, nssv3562191, nssv3562164, nssv3562078, nssv3562216, nssv3562232, nssv3562038, nssv3562260, nssv3562011, nssv3562096, nssv3562213, nssv3562122, nssv3720784, nssv3562233, nssv3562075, nssv3562015, nssv3562127, nssv3562243, nssv3562253, nssv3562094, nssv3562151, nssv3561984, nssv3562148, nssv3562069, nssv3562016, nssv3562092, nssv3561991, nssv3562110, nssv3562095, nssv3561986, nssv3562014, nssv3562237, nssv3562084, nssv3562144, nssv3561992, nssv3562267, nssv3562199, nssv3562081, nssv3562047, nssv3562167, nssv3562003, nssv3562050, nssv3561989, nssv3562033, nssv3562000, nssv3562224, nssv3562125, nssv3562079, nssv3562262, nssv3562261, nssv3562154, nssv3562256, nssv3562238, nssv3562045, nssv3561996, nssv3562124, nssv3562099, nssv3562190, nssv3562034, nssv3562201, nssv3562132, nssv3562017, nssv3562163, nssv3562134, nssv3562111, nssv3562170, nssv3562083, nssv3720783, nssv3720789, nssv3562103, nssv3562247, nssv3562219, nssv3562188, nssv3562028, nssv3720773, nssv3562207, nssv3720792, nssv3562180, nssv3562182, nssv3562146, nssv3562010, nssv3561988, nssv3562177, nssv3720797, nssv3562073, nssv3562006, nssv3562019, nssv3562229, nssv3562225, nssv3562245, nssv3562227, nssv3720775, nssv3562126, nssv3720793, nssv3562185, nssv3562066, nssv3561985, nssv3562221, nssv3562217, nssv3562175, nssv3562258, nssv3561994, nssv3562008, nssv3562013, nssv3562248, nssv3562223, nssv3562007, nssv3720782, nssv3720778, nssv3562240, nssv3562140, nssv3720771, nssv3720772, nssv3562252, nssv3562220, nssv3720803, nssv3562119, nssv3720780, nssv3562239, nssv3562158, nssv3562137, nssv3562198, nssv3562042, nssv3562002, nssv3562043, nssv3562022, nssv3562120, nssv3562021, nssv3562257, nssv3562246, nssv3562210, nssv3562168, nssv3562200, nssv3562230, nssv3562142, nssv3562063, nssv3562089, nssv3562231, nssv3562235, nssv3720799, nssv3562234, nssv3720790, nssv3562254, nssv3720802, nssv3562074, nssv3562236, nssv3562112, nssv3562186, nssv3562108, nssv3562150, nssv3562062, nssv3562049, nssv3562259, nssv3562218, nssv3562215, nssv3562255, nssv3720777, nssv3720776, nssv3562152, nssv3562018, nssv3562202, nssv3562026, nssv3562118, nssv3720801, nssv3562071, nssv3562192, nssv3720798, nssv3562189, nssv3720788, nssv3562195, nssv3562156, nssv3561998, nssv3562143, nssv3562222, nssv3562068, nssv3562005, nssv3562265, nssv3562241, nssv3562053, nssv3562155, nssv3562044, nssv3562165, nssv3562161, nssv3562129, nssv3562030, nssv3562172, nssv3562067, nssv3562115, nssv3562059, nssv3562051, nssv3562169, nssv3562264, nssv3562009, nssv3562149, nssv3720804, nssv3562263, nssv3562029, nssv3720787, nssv3562105, nssv3562106, nssv3562055

Samples

Known Genes

CCL3L1, CCL3L3, CCL4L1, CCL4L2, TBC1D3B, TBC1D3H

Method

SNP array

Analysis

Affymetrix SNP array copy number analysis

Platform

Affymetrix SNP Array 6.0

Comments

Reference

Coe_et_al_2014

Pubmed ID

Accession Number(s)

Frequency

Sample Size	29084
Observed Gain	321
Observed Loss	0
Observed Complex	0
Frequency	n/a