A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1053836



Internal ID19143055
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20011690..22270474hg38UCSC Ensembl
Innerchr15:20216943..22558425hg19UCSC Ensembl
Innerchr15:18476957..20059789hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382258785
hg192341483
hg181582833
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2192n100
Supporting Variantsnssv3537028, nssv3537025, nssv3537027, nssv3537023, nssv3537026, nssv3537024
Samples
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1053836
Frequency
Sample Size11257
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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