A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1049309



Internal ID19138528
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:5766838..5788219hg38UCSC Ensembl
Innerchr11:5788068..5809449hg19UCSC Ensembl
Innerchr11:5744644..5766025hg18UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg3821382
hg1921382
hg1821382
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1049n100
Supporting Variantsnssv3511057, nssv3511525, nssv3503386, nssv3510927, nssv3519305, nssv3510649, nssv3517746, nssv3507465, nssv3507059, nssv3707492, nssv3513562, nssv3512225, nssv3518344, nssv3521341, nssv3519475, nssv3506204, nssv3505465, nssv3511730, nssv3517620, nssv3502970, nssv3521303, nssv3505959, nssv3509446, nssv3514931, nssv3507166, nssv3522269, nssv3508926, nssv3707487, nssv3521495, nssv3511559, nssv3507871, nssv3505980, nssv3522635, nssv3707491, nssv3520968, nssv3511291, nssv3510025, nssv3521696, nssv3707489, nssv3514223, nssv3707490, nssv3503458, nssv3511368, nssv3707488, nssv3516655, nssv3520615, nssv3503916, nssv3522145, nssv3512924, nssv3513932, nssv3518772, nssv3516863, nssv3509721, nssv3517374, nssv3507593, nssv3503971, nssv3514567, nssv3505304, nssv3518868, nssv3707486, nssv3506340, nssv3504211, nssv3509035, nssv3516992, nssv3509170, nssv3504427, nssv3511603
Samples
Known GenesOR52N1, OR52N5
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1049309
Frequency
Sample Size11257
Observed Gain7
Observed Loss60
Observed Complex0
Frequencyn/a


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