A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1048279



Internal ID19137498
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:25171567..25252158hg38UCSC Ensembl
Innerchr15:25416714..25497305hg19UCSC Ensembl
Innerchr15:22967807..23048398hg18UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3880592
hg1980592
hg1880592
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2483n100
Supporting Variantsnssv3545543, nssv3721466, nssv3545542, nssv3545536, nssv3545547, nssv3545538, nssv3545540, nssv3545537, nssv3545545, nssv3545541, nssv3545535, nssv3545544, nssv3545546, nssv3545539
Samples
Known GenesPWAR4, SNORD115-10, SNORD115-11, SNORD115-12, SNORD115-13, SNORD115-14, SNORD115-15, SNORD115-16, SNORD115-17, SNORD115-18, SNORD115-19, SNORD115-2, SNORD115-20, SNORD115-21, SNORD115-22, SNORD115-23, SNORD115-24, SNORD115-25, SNORD115-26, SNORD115-27, SNORD115-28, SNORD115-29, SNORD115-3, SNORD115-30, SNORD115-31, SNORD115-32, SNORD115-33, SNORD115-34, SNORD115-35, SNORD115-36, SNORD115-37, SNORD115-38, SNORD115-39, SNORD115-4, SNORD115-40, SNORD115-41, SNORD115-42, SNORD115-43, SNORD115-44, SNORD115-5, SNORD115-6, SNORD115-7, SNORD115-8, SNORD115-9
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1048279
Frequency
Sample Size11257
Observed Gain12
Observed Loss2
Observed Complex0
Frequencyn/a


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