A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1047898



Internal ID18790429
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:15388065..18284986hg38UCSC Ensembl
Innerchr16:15481922..18378843hg19UCSC Ensembl
Innerchr16:15389423..18286344hg18UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg382896922
hg192896922
hg182896922
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3557969
Samples
Known GenesABCC1, ABCC6, C16orf45, FOPNL, KIAA0430, LOC100288162, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR484, MIR6506, MIR6511A-2, MIR6770-2, MPV17L, MYH11, NDE1, NOMO3, NPIPA7, NPIPA8, PKD1P1, XYLT1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1047898
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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