A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1046536



Internal ID19135755
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20381480..22300068hg38UCSC Ensembl
Innerchr15:20586733..22588019hg19UCSC Ensembl
Innerchr15:18846747..20089383hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381918589
hg192001287
hg181242637
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2192n100
Supporting Variantsnssv3538752, nssv3714758, nssv3714757, nssv3714759, nssv3538756, nssv3538737, nssv3538739, nssv3538743, nssv3538738, nssv3538736, nssv3538742, nssv3538757, nssv3538754, nssv3538746, nssv3538751, nssv3538755, nssv3538747, nssv3538749, nssv3538740, nssv3538750, nssv3538745, nssv3538758, nssv3714760, nssv3538753, nssv3538744, nssv3538748, nssv3538741
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1046536
Frequency
Sample Size11257
Observed Gain0
Observed Loss27
Observed Complex0
Frequencyn/a


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