A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1042677



Internal ID18785208
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:47993784..49928329hg38UCSC Ensembl
Innerchr10:49201820..51136375hg19UCSC Ensembl
Innerchr10:48871826..50806381hg18UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg381934546
hg191934556
hg181934556
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3706903
Samples
Known GenesARHGAP22, C10orf128, C10orf53, C10orf71, C10orf71-AS1, CHAT, CTGLF12P, DRGX, ERCC6, ERCC6-PGBD3, FAM170B, FAM170B-AS1, FAM25C, FAM25G, FRMPD2, FRMPD2P1, LRRC18, MAPK8, MIR4294, OGDHL, PARG, PGBD3, SLC18A3, VSTM4, WDFY4
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1042677
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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