A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1041396



Internal ID19130615
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20380825..22300068hg38UCSC Ensembl
Innerchr15:20586078..22588019hg19UCSC Ensembl
Innerchr15:18846092..20089383hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381919244
hg192001942
hg181243292
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2192n100
Supporting Variantsnssv3538681, nssv3714735, nssv3538675, nssv3538680, nssv3538677, nssv3538676, nssv3538682, nssv3538679, nssv3538674, nssv3538678
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1041396
Frequency
Sample Size11257
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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