A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1040821



Internal ID19130040
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20381480..22308242hg38UCSC Ensembl
Innerchr15:20586733..22681064hg19UCSC Ensembl
Innerchr15:18846747..20232428hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381926763
hg192094332
hg181385682
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2183n100
Supporting Variantsnssv3714762, nssv3538762, nssv3539532, nssv3539531, nssv3714763
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, MIR4509-1, MIR4509-2, MIR4509-3, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1040821
Frequency
Sample Size11257
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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