A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1040778



Internal ID18783309
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:28689598..30515727hg38UCSC Ensembl
Innerchr15:28934744..30807930hg19UCSC Ensembl
Innerchr15:26733785..28595222hg18UCSC Ensembl
Cytoband15q13.1
Allele length
AssemblyAllele length
hg381826130
hg191873187
hg181861438
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3721480
Samples
Known GenesAPBA2, CHRFAM7A, DKFZP434L187, FAM189A1, GOLGA6L7P, GOLGA8J, GOLGA8M, GOLGA8T, LOC100289656, LOC101059918, LOC646278, NDNL2, TJP1, ULK4P1, ULK4P2, ULK4P3, WHAMMP2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1040778
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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