A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1040538



Internal ID19129757
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:14954899..15014718hg38UCSC Ensembl
Innerchr16:15048756..15108575hg19UCSC Ensembl
Innerchr16:14956257..15016076hg18UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg3859820
hg1959820
hg1859820
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2762n100
Supporting Variantsnssv3557734, nssv3557726, nssv3557729, nssv3557730, nssv3557735, nssv3557728, nssv3557731, nssv3557733, nssv3557736, nssv3557732, nssv3557725, nssv3557737, nssv3557727
Samples
Known GenesMIR1972-1, MIR1972-2, PDXDC1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1040538
Frequency
Sample Size11257
Observed Gain3
Observed Loss10
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer