A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1040398



Internal ID19129617
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20380723..22296468hg38UCSC Ensembl
Innerchr15:20585976..22584419hg19UCSC Ensembl
Innerchr15:18845990..20085783hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381915746
hg191998444
hg181239794
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2192n100
Supporting Variantsnssv3537384, nssv3537383
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1040398
Frequency
Sample Size11257
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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