A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1040115



Internal ID19129334
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20381480..22270474hg38UCSC Ensembl
Innerchr15:20586733..22558425hg19UCSC Ensembl
Innerchr15:18846747..20059789hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381888995
hg191971693
hg181213043
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2192n100
Supporting Variantsnssv3538733, nssv3538732, nssv3538731, nssv3538735, nssv3538734
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1040115
Frequency
Sample Size11257
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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