A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1038335



Internal ID19127554
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20078801..22100273hg38UCSC Ensembl
Innerchr15:20284054..22388224hg19UCSC Ensembl
Innerchr15:18544068..19889588hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382021473
hg192104171
hg181345521
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2190n100
Supporting Variantsnssv3536630, nssv3536631, nssv3536629, nssv3536633, nssv3536632
Samples
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N4, POTEB, POTEB2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1038335
Frequency
Sample Size11257
Observed Gain4
Observed Loss1
Observed Complex0
Frequencyn/a


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