A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1038020



Internal ID19127239
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:14869830..15022388hg38UCSC Ensembl
Innerchr16:14963687..15116245hg19UCSC Ensembl
Innerchr16:14871188..15023746hg18UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg38152559
hg19152559
hg18152559
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2752n100
Supporting Variantsnssv3557586, nssv3557585, nssv3718919, nssv3557587, nssv3557583, nssv3557584
Samples
Known GenesLOC100288162, MIR1972-1, MIR1972-2, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR6511A-2, MIR6770-2, NOMO1, NPIPA1, PDXDC1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1038020
Frequency
Sample Size11257
Observed Gain3
Observed Loss3
Observed Complex0
Frequencyn/a


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