A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1035089



Internal ID18777620
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:7392846..7952372hg38UCSC Ensembl
Innerchr8:7250368..7809894hg19UCSC Ensembl
Innerchr8:7237778..7847304hg18UCSC Ensembl
Cytoband8p23.1
Allele length
AssemblyAllele length
hg38559527
hg19559527
hg18609527
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv6936n100
Supporting Variantsnssv3679457, nssv3755190, nssv3679468, nssv3679444, nssv3679470, nssv3679475, nssv3679492, nssv3679440, nssv3755207, nssv3679471, nssv3679493, nssv3755193, nssv3679479, nssv3679446, nssv3679473, nssv3755204, nssv3679463, nssv3755188, nssv3755202, nssv3679459, nssv3679469, nssv3679449, nssv3679472, nssv3755205, nssv3679500, nssv3679458, nssv3679447, nssv3679451, nssv3679497, nssv3679482, nssv3679452, nssv3755209, nssv3679502, nssv3755208, nssv3679494, nssv3679480, nssv3679464, nssv3679498, nssv3679484, nssv3755197, nssv3679487, nssv3679474, nssv3679466, nssv3755206, nssv3679503, nssv3755210, nssv3679462, nssv3755191, nssv3755189, nssv3679454, nssv3679495, nssv3755211, nssv3679501, nssv3679455, nssv3755194, nssv3679465, nssv3755213, nssv3755212, nssv3679456, nssv3679477, nssv3679499, nssv3679491, nssv3679448, nssv3679453, nssv3755214, nssv3679467, nssv3679483, nssv3679481, nssv3755196, nssv3679443, nssv3679485, nssv3755200, nssv3679450, nssv3679488, nssv3679461, nssv3679460, nssv3679486, nssv3755199, nssv3679442, nssv3755203, nssv3679476, nssv3679490, nssv3755192, nssv3755195, nssv3755201, nssv3679478, nssv3679445, nssv3755215, nssv3755198, nssv3679496, nssv3679441, nssv3679489
Samples
Known GenesDEFB103A, DEFB103B, DEFB104A, DEFB104B, DEFB105A, DEFB105B, DEFB106A, DEFB106B, DEFB107A, DEFB107B, DEFB4A, DEFB4B, FAM90A10P, FAM90A7P, PRR23D1, PRR23D2, SPAG11A, SPAG11B, ZNF705B
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1035089
Frequency
Sample Size29084
Observed Gain51
Observed Loss41
Observed Complex0
Frequencyn/a


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