A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1029669



Internal ID18772200
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:29876245..29949926hg38UCSC Ensembl
Innerchr6:29844022..29917703hg19UCSC Ensembl
Innerchr6:29952001..30025682hg18UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3873682
hg1973682
hg1873682
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3655770
Samples
Known GenesHCG4B, HLA-A, HLA-H
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1029669
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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