A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1027396



Internal ID19116615
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32488894..32589524hg38UCSC Ensembl
Innerchr6:32456671..32557301hg19UCSC Ensembl
Innerchr6:32564649..32665279hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38100631
hg19100631
hg18100631
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv5950n100
Supporting Variantsnssv3657332, nssv3745470, nssv3657334, nssv3657335, nssv3657336, nssv3657333
Samples
Known GenesHLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1027396
Frequency
Sample Size11257
Observed Gain5
Observed Loss1
Observed Complex0
Frequencyn/a


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