A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1025792



Internal ID19115009
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:7409831..7930428hg38UCSC Ensembl
Innerchr8:7267353..7787950hg19UCSC Ensembl
Innerchr8:7254763..7825360hg18UCSC Ensembl
Cytoband8p23.1
Allele length
AssemblyAllele length
hg38520598
hg19520598
hg18570598
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv6936n100
Supporting Variantsnssv3679848, nssv3679886, nssv3679918, nssv3679877, nssv3679910, nssv3679896, nssv3756415, nssv3679885, nssv3756408, nssv3679908, nssv3679851, nssv3679881, nssv3679864, nssv3679855, nssv3679870, nssv3679888, nssv3756422, nssv3679890, nssv3679868, nssv3679859, nssv3756411, nssv3756431, nssv3756413, nssv3679862, nssv3756419, nssv3679856, nssv3756430, nssv3679911, nssv3679863, nssv3756409, nssv3679850, nssv3679849, nssv3679901, nssv3679914, nssv3679915, nssv3756414, nssv3756407, nssv3679865, nssv3679866, nssv3679883, nssv3679846, nssv3756425, nssv3679902, nssv3756424, nssv3756412, nssv3679873, nssv3679906, nssv3756421, nssv3679907, nssv3756418, nssv3756423, nssv3679854, nssv3679880, nssv3679899, nssv3679903, nssv3679917, nssv3679887, nssv3679889, nssv3679857, nssv3679916, nssv3679895, nssv3679897, nssv3679894, nssv3679876, nssv3679874, nssv3679858, nssv3679879, nssv3679869, nssv3679904, nssv3679912, nssv3679867, nssv3679878, nssv3679909, nssv3679893, nssv3679860, nssv3756428, nssv3756417, nssv3679845, nssv3679900, nssv3679852, nssv3756429, nssv3756406, nssv3756403, nssv3679872, nssv3679861, nssv3679892, nssv3756427, nssv3679891, nssv3756416, nssv3679844, nssv3756426, nssv3679905, nssv3679875, nssv3756405, nssv3679898, nssv3679853, nssv3679882, nssv3679884, nssv3756404, nssv3679913, nssv3679847, nssv3756410, nssv3756420, nssv3679871
Samples
Known GenesDEFB103A, DEFB103B, DEFB104A, DEFB104B, DEFB105A, DEFB105B, DEFB106A, DEFB106B, DEFB107A, DEFB107B, DEFB4A, DEFB4B, FAM90A10P, FAM90A7P, PRR23D1, PRR23D2, SPAG11A, SPAG11B, ZNF705B
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1025792
Frequency
Sample Size11257
Observed Gain73
Observed Loss31
Observed Complex0
Frequencyn/a


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