A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv1025789



Internal ID19115006
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:144264181..144369842hg38UCSC Ensembl
Innerchr7:143961274..144066935hg19UCSC Ensembl
Innerchr7:143592207..143697868hg18UCSC Ensembl
Cytoband7q35
Allele length
AssemblyAllele length
hg38105662
hg19105662
hg18105662
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv6744n100
Supporting Variantsnssv3674183, nssv3674184, nssv3674185
Samples
Known GenesARHGEF34P, ARHGEF5, CTAGE4, CTAGE8, OR2A1, OR2A20P, OR2A42, OR2A9P, RNU6-57P
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nsv1025789
Frequency
Sample Size11257
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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